BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B10SP1|AL425078
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1569 0.0
>3x_Contig1801
Length = 57606
Score = 1569 bits (787), Expect = 0.0
Identities = 848/877 (96%), Gaps = 1/877 (0%)
Strand = Plus / Plus
Query: 27 acacgggc-ccttctctctcgagaacgatacaaggtacgtcgttcaaaaccaaatatcgt 85
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26876 acacgggcaccttctctctcgagaacgatacaaggtacgtcgttcaaaaccaaatatcgt 26935
Query: 86 aatcttttcaaatttgagagtatagttgtatatgtctttttattgtgatgaaccattgca 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26936 aatcttttcaaatttgagagtatagttgtatatgtctttttattgtgatgaaccattgca 26995
Query: 146 tgatagcmcttgatgacgtcagattctgtgatgggttcaatcggggttgagtttctatgc 205
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26996 tgatagcacttgatgacgtcagattctgtgatgggttcaatcggggttgagtttctatgc 27055
Query: 206 atggatttatagtgcctattgtattcattaatcttggtgacgaagtccgagagattcatt 265
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 27056 atggatttatagtgcctattgtattcattaatcttggtgaagaagtaagagagattcatt 27115
Query: 266 ggttgtgtcctaacagaagggtatatgtcaaatgcttttgaataaggtaataaagagagg 325
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 27116 ggttgtgtcctaacagaagggtatatataaaatgcttttgaataaggtaataaagagagg 27175
Query: 326 tatttcatcattgtgaatatatccttagcgatcaaatcgcttaaatctctgatcaccata 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27176 tatttcatcattgtgaatatatccttagcgatcaaatcgcttaaatctctgatcaccata 27235
Query: 386 tctttcgacgaattgaaaaatttaccgtatagtatatcctgaaacacatgattacvatca 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 27236 tctttcgacgaattgaaaaatttaccgtatagtatatcctgaaacacatgattacaatca 27295
Query: 446 tcacaatggcagttatgtaagavtttgaaccttgacccctcgatagaratgatctgcctg 505
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 27296 tcacaatggcagttatgtaagaatttgaaccttgacccctcgatagaaatgatctgcctg 27355
Query: 506 tcgatattttcgaatctcaaatctaggaattgtagctctctacaatttaataaaatggac 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27356 tcgatattttcgaatctcaaatctaggaattgtagctctctacaatttaataaaatggac 27415
Query: 566 aggaatacatccgttgaaacaggatgtggagtgaactcatgcaaaanatctgtcttcaac 625
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 27416 aggaatacatccgttgaaacaggatgtggagtgaactcatgcaaaaaatctgtcttcaac 27475
Query: 626 cttttcaaattcttcaaacgtttgagaagttcgatgagtatggctggattttgtctcata 685
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 27476 cttttcaaattcttcaaacgtttgaaaagttcgatgagtatggctggattttgtctcata 27535
Query: 686 gatatragagataaatcccgnatttctgnnnnctcgnnnaattcngncnnnatttccaat 745
||||| |||||||||||||| ||||||| |||| ||||| | | |||||||||
Sbjct: 27536 gatataagagataaatcccgaatttctgtaaactcgtaaaattcagtcaaaatttccaat 27595
Query: 746 tctcgtttattcaaattctcattccatgatatgattgtkaacacctttaaagttctcaca 805
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 27596 tctcgtttattcaaattctcattccatgatatgattgttaacacctttaaagttctcaca 27655
Query: 806 tcgaagacatctgaragtttagtaagcttcgggtattggttcagcggtttcaattgatcg 865
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27656 tcgaagacatctgaaagtttagtaagcttcgggtattggttcagcggtttcaattgatcg 27715
Query: 866 ggcggataatattctttcctccaatgtagtttmaagt 902
|||||||||||||||||||||||||||||||| ||||
Sbjct: 27716 ggcggataatattctttcctccaatgtagtttcaagt 27752
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6312
Number of Sequences: 1807
Number of extensions: 6312
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)